ETC Components
Plastoquinone refers to a family of lipid-soluble benzoquinone derivatives with an isoprenoid side chain. In chloroplasts, the common form of plastoquinone contains nine repeating isoprenoid units. Plastoquinone possesses varied redox states, which together with its ability to bind protons and its small size enables it to act as a mobile electron carrier shuttling hydrogen atoms from PSII to the cytochrome b6f complex.
Plastoquinone plays an additional role in the cytochrome b6f complex, operating in a complicated reaction sequence known as a Q-cycle. When QB is reduced in PSII, it not only receives two electrons from QA but it also picks up two protons from the stroma matrix and becomes QBH2. It is able to carry both electrons and protons (e- and H+ carrier). At the cytochrome b6f complex level it is then oxidized, but FeS and cytochrome b6 can accept only electrons and not protons. So the two protons are released into the lumen. The Q-cycle of the cytochrome b6f complex is great because it provides extra protons into the lumen. Here two electrons travel through the two hemes of cytochrome b6 and then reduce QB on the stroma side of the membrane. The reduced QB takes on two protons from the stroma, becoming QBH2, which migrates to the lumen side of the cytochrome b6f complex where it is again oxidized, releasing two more protons into the lumen. Thus he Q-cycle allows the formation of more ATP. This Q-cycle links the oxidation of plastoquinol (QBH2) at one site on the cytochrome b6f complex to the reduction of plastoquinone at a second site on the complex in a process that contributes additional free energy to the electrochemical proton potential.
The cytochrome b6f exists as a dimer of 217 kDa. The monomeric complex contains four large subunits (18–32 kDa), including cytochrome f, cytochrome b6, the Rieske FeS iron-sulfur protein (ISP), and subunit IV, as well as four small hydrophobic subunits, PetG, PetL, PetM, and PetN. The monomeric unit contains 13 transmembrane helices: four in cytochrome b6 (helices A to D); three in subunit IV (helices E to G); and one each in cytochrome f, the ISP, and the four small hydrophobic subunits PetG, PetL, PetM, and PetN. The monomer includes four hemes, one [2Fe-2S] cluster, one chlorophyll a, one β-carotene, and one plastoquinone. The extrinsic domains of cytochrome f and the ISP are on the luminal side of the membrane and are ordered in the crystal structure. Loops and chain termini on the stromal side are less well ordered. The ISP contributes to dimer stability by domain swapping, its transmembrane helix obliquely spans the membrane in one monomer, and its extrinsic domain is part of the other monomer. The two monomers form a protein-free central cavity on each side of the transmembrane interface.
Plastocyanin operates in the inner aqueous phase of the photosynthetic vesicle, transferring electrons from cytochrome f to PSI. It is a small protein (10 kDa) composed of a single polypeptide that is coded for in the nuclear genome. Plastocyanin is a β-sheet protein with copper as the central ion that is ligated to four residues of the polypeptide. The copper ion serves as a one-electron carrier with a midpoint redox potential (0.37 eV) near that of cytochrome f. Plastocyanin shuttles electrons from the cytochrome b6f complex to PSI by diffusion. Plastocyanin is more common in green algae and completely substitutes for cytochrome c6 in the chloroplasts of higher plants. In cyanobacteria and green algae where both cytochrome c6 and plastocyanin are encoded, the alternative expression of the homologous protein is regulated by the availability of copper.
Once an electron reaches ferredoxin, however, the electron pathway branches, enabling redox free energy to enter other metabolic pathways in the chloroplast. For example, ferredoxin can transfer electrons to nitrite reductase, glutamate synthase, and thioredoxin reductase.