How Cells Are Studied

How Cells Are Studied
Liver cells. A, Magnified approximately 400 times through light microscopy. Note the prominently stained nucleus in each polyhedral cell. B, Portion of single liver cell, magnified approximately 5000 times by electron microscopy. A single large nucleus dominates the field; mitochondria (M), rough endoplasmic reticulum (RER), and glycogen granules (G), are also seen.
Figure 3-1 Liver cells. A, Magnified approximately 400
times through light microscopy. Note the prominently
stained nucleus in each polyhedral cell. B, Portion of single
liver cell, magnified approximately 5000 times by electron
microscopy. A single large nucleus dominates the field;
mitochondria (M), rough endoplasmic reticulum (RER), and
glycogen granules (G), are also seen.
Light microscopes, with all their variations and modifications, have contributed more to biological investigation than any other instrument developed by humans. They have been powerful exploratory tools for 300 years, and they continue to be so more than 50 years after invention of the electron microscope. However, electron microscopy has vastly enhanced our appreciation of the delicate internal organization of cells, and modern biochemical, immunological, physical, and molecular techniques have contributed enormously to our understanding of cell structure and function.

Electron microscopes employ high voltages to direct a beam of electrons through objects examined. The wavelength of the electron beam is approximately 0.00001 that of ordinary white light, thus permitting far greater magnification and resolution (compare A and B of Figure 3-1). In preparation for viewing, specimens are cut into extremely thin sections (10 nm to 100 nm thick) and treated with “electron stains” (ions of elements such as osmium, lead, and uranium) to increase contrast between different structures. Images are seen on a fluorescent screen and photographed (Figure 3-2). Because electrons pass through the specimen to the photographic plate, the instrument is called a transmission electron microscope.

In contrast, specimens prepared for scanning electron microscopy are not sectioned, and electrons do not pass through them. The whole specimen is bombarded with electrons, causing secondary electrons to be emitted. An apparent three-dimensional image is recorded in the photograph. Although the magnification capability of scanning instruments is not as great as transmission microscopes, much has been learned about the surface features of organisms and cells.
A still greater level of resolution can be achieved with X-ray crystallography and nuclear magnetic resonance (NMR) spectroscopy. These techniques reveal a great deal about the shape of biomolecules and the relationship of the atoms within them to each other. Both techniques are laborious, but NMR spectroscopy does not require purification and crystallization of a substance, and molecules can be observed in solution.

Advances in techniques of cell study (cytology) are not limited to improvements in microscopes but include new methods of tissue preparation, staining for microscopic study, and the great contributions of modern biochemistry and molecular biology. For example, the various organelles of cells have differing, characteristic densities. Cells can be broken up with most of the organelles remaining intact, then centrifuged in a density gradient (Figure 3-3), and relatively pure preparations of each organelle may be recovered. Thus the biochemical functions of various organelles may be studied separately. DNA and various types of RNA can be extracted and studied. Many enzymes can be purified and their characteristics determined. The use of radioactive isotopes has allowed elucidation of many metabolic reactions and pathways in cells. Modern chromatographic techniques can separate chemically similar intermediates and products. A particular protein in cells can be extracted and purified, and specific antibodies against the protein can be prepared. When the antibody is complexed with a fluorescent substance and the complex is used to stain cells, the complex binds to the protein of interest, and its precise location in cells can be determined. Many more examples could be cited, and these have contributed enormously to our present understanding of cell structure and function.

Comparison of optical paths of light and electron microscopes. To facilitate comparison, the scheme of the light microscope has been inverted from its usual orientation with light source below and image above. In an electron microscope the lenses are magnets to focus the beam of electrons.
Figure 3-2 Comparison of optical paths of light and electron microscopes. To facilitate comparison, the scheme of the light microscope has been inverted from its usual orientation with light source below and image above. In an electron microscope the lenses are magnets to focus the beam of electrons.
 
Separation of cell organelles in a density gradient by ultracentrifugation. The gradient is formed by layering sucrose solutions in a centrifuge tube, then carefully placing a preparation of mixed organelles on top. The tube is centrifuged at about 40,000 revolutions per minute for several hours, and the organelles become separated down the tube according to their density.
Figure 3-3 Separation of cell organelles in a density gradient by ultracentrifugation. The gradient is formed by layering sucrose solutions in a centrifuge tube, then carefully placing a preparation of mixed organelles on top. The tube is centrifuged at about 40,000 revolutions per minute for several hours, and the organelles become separated down the tube according to their density.